Visualize Hi-C data in a virtual 4C format, in which the queried region is used as the bait. Combined with ChIA-PET, DHS-linkage and gene expression data, this page allows investigators make hypothesis of promoter-enhancer interactions.

Visualizing Hi-C/Virtual 4C Data

Step 1. Choose the species and assembly:

Species Assembly

Step 2. Choose the source of the data:

Browse Available Hi-C Data

Organ

Tissue Type Resolution

Use Your Own Data

Data URL

Step 3. Enter Gene Symbol, SNP rsid, or genomic locus(chr3:5000000)

Gene Name/SNP rsid Extended region in kb (default ± 500kb)

Optional: External Browsers

Simply load your UCSC or WashU session link, and then copy and paste the URL in the textbox.
NoneUCSC Genome Browser SessionWashU Epigenome Browser

The browser is developed with Google Chrome 42*. While we test our browser on a variety of web browsers and operating systems, we recommend our users to use Chrome for the most optimal experience.